Index

A

add_to_path_end() (in module acidbase)

add_to_path_start() (in module acidbase)

B

barcode_pattern (in module acidbase)

basename_sans_ext() (in module acidbase)

C

collapse_to_path_string() (in module acidbase)

compress() (in module acidbase) cpus() (in module acidbase)

D

decompress() (in module acidbase)

download() (in module acidbase) dupes() (in module acidbase)

E

euclidean() (in module acidbase)

F

file_depth() (in module acidbase)

file_ext() (in module acidbase) fold_change_to_log_ratio() (in module acidbase)

G

genome_metadata_names (in module acidbase) geometric_mean() (in module acidbase)

git_current_branch() (in module acidbase) git_default_branch() (in module acidbase)

H

headtail() (in module acidbase)

I

init_dir() (in module acidbase)

intersect_all() (in module acidbase) intersection_matrix() (in module acidbase)

K

keep_only_atomic_cols() (in module acidbase)

L

lane_pattern (in module acidbase)

log_ratio_to_fold_change() (in module acidbase)

M

major_minor_version() (in module acidbase) major_version() (in module acidbase) match_all() (in module acidbase)

match_nested() (in module acidbase) metadata_denylist (in module acidbase) metrics_cols (in module acidbase) minor_version() (in module acidbase)

N

not_dupes() (in module acidbase)

P

parent_dir() (in module acidbase) parent_directory() (in module acidbase)

paste_url() (in module acidbase) pkg_cache_dir() (in module acidbase) print_string() (in module acidbase)

Q

quietly() (in module acidbase)

R

ram() (in module acidbase) random_string() (in module acidbase)

ranked_matrix() (in module acidbase) realpath() (in module acidbase) remove_from_path() (in module acidbase)

S

sanitize_version() (in module acidbase) sem() (in module acidbase) shell() (in module acidbase) show_header() (in module acidbase) show_slot_info() (in module acidbase) simple_class() (in module acidbase) split_path_string() (in module acidbase)

str_extract() (in module acidbase) str_extract_all() (in module acidbase) str_match() (in module acidbase) str_match_all() (in module acidbase) str_pad() (in module acidbase) str_remove_empty() (in module acidbase) str_replace_na() (in module acidbase) str_split() (in module acidbase)

T

tempdir2() (in module acidbase)

truncate_string() (in module acidbase)

U

unique_path_string() (in module acidbase)

unlink2() (in module acidbase) update_message (in module acidbase)

Z

zscore() (in module acidbase)